Criteriaa | Requirements for "Positive" Assignment of Q (query)b, c |
---|---|
"Liberal" | Q is sister to a single member of a taxon, (Aus aus, Q), or a clade of members of a single taxon, ((Aus aus, Aus bus)Q), the assignment is that of the taxon Aus. |
"Strict" | Q is nested within a clade comprising of members of a single taxon, (Aus aus, Q)Aus bus), the assignment is that of the taxon Aus. |
"Liberal & exclusive" | Q is sister to a single member of a taxon, (Aus bus, Q), or a clade of members of a single taxon, ((Aus aus, Aus bus)Q), and members of taxon, Aus, are not found elsewhere on the tree except in an Aus+Q clade, the assignment is that of the taxon Aus. |
"Strict & exclusive" | Q is nested within a clade of a single taxon, ((Aus aus, Q)Aus bus), and members of Aus are not found elsewhere on the tree except in an Aus+Q clade, the assignment is that of the taxon Aus. |
"Best match" | Q is simply assigned to the genus of the most similar library sequence based on K2P distance. |
"Best close match" | Q is assigned to the genus of the most similar library sequence based on K2P distance provided it falls below a threshold value. |